refactor: Modularize UI components and utilities

- Extract UI components into separate JS files
- Centralize configuration values in config.js
- Introduce a dedicated logger module
- Improve file tree drag-and-drop and undo functionality
- Refactor modal handling to a single manager
- Add URL routing support for SPA navigation
- Implement view mode for read-only access

collections/notes/tests/test2.md

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